CT@IMBL-2017B
from
Monday, 23 October 2017 (00:00)
to
Tuesday, 24 October 2017 (18:25)
Monday, 23 October 2017
09:00
Coffee and Tea
09:00 - 09:30
Room: NCSS Seminar room
09:30
Welcome and introduction
09:30 - 09:45
Room: NCSS Seminar room
09:50
IMBL characteristics: X-ray characteristics and general imaging
X-ray characteristics and general imaging
09:50 - 10:20
Room: NCSS Seminar room
10:20
Phase Contrast: Phase contrast CT
Phase contrast CT
10:20 - 10:45
Room: NCSS Seminar room
10:45
Coffee and tea break
10:45 - 11:15
Room: NCSS Seminar room
11:20
IMBL User interfaces: Our Graphical User Interfaces
Our Graphical User Interfaces
11:20 - 11:45
Room: NCSS Seminar room
11:45
CT data collection: Sample alignment and ways to run a CT
Sample alignment and ways to run a CT
11:45 - 12:10
Room: NCSS Seminar room
12:15
Data management: Where your data is stored, and how to access it
Where your data is stored, and how to access it
12:15 - 12:35
Room: NCSS Seminar room
12:35
Lunch break
Lunch break
12:35 - 13:15
Room: NCSS Seminar room
13:15
Visit to the IMBL
13:15 - 14:00
Room: IMBL
14:00
An introduction to ASCI Desktop: The User Interface to the AS cluster
The User Interface to the AS cluster
14:00 - 14:25
Room: NCSS Seminar room
14:30
Data visualisation with Fiji
14:30 - 14:50
Room: NCSS Seminar room
14:55
The basics of CT reconstruction: Going from a projection set to a clean volume set
Going from a projection set to a clean volume set
14:55 - 15:20
Room: NCSS Seminar room
15:20
Tea break
Tea break
15:20 - 16:00
Room: NCSS Seminar room
16:00
Remote access: Practical session with ASCI Desktop
Practical session with ASCI Desktop
16:00 - 16:40
Room: NCSS Seminar room
16:40
CT artefacts: How to avoid/handle them: Practical session using the ASCI Desktop
Practical session using the ASCI Desktop
16:40 - 17:30
Room: NCSS Seminar room
17:30
Supper
17:30 - 19:55
Room: Kitchen Synch
Tuesday, 24 October 2017
09:00
Recap
09:00 - 09:10
Room: NCSS Seminar room
09:10
Optimising the quality of your raw data
09:10 - 09:30
Room: NCSS Seminar room
09:30
IMBL detectors: What they are and their characteristics
09:30 - 09:50
Room: NCSS Seminar room
09:50
Introducing HDF5: A new data storage format
A new data storage format
09:50 - 10:00
Room: NCSS Seminar room
10:05
Scripting your workflow: Batch processing many images
Batch processing many images
10:05 - 10:25
Room: NCSS Seminar room
10:25
Coffee break
Coffee break
10:25 - 11:05
Room: NCSS Seminar room
11:05
3D data visualisation: Rendering with Drishti
Rendering with Drishti
11:05 - 11:45
Room: NCSS Seminar room
11:50
User Experiences: Learn how others use IMBL
Learn how others use IMBL
11:50 - 12:30
Room: NCSS Seminar room
12:30
Lunch break
Lunch break
12:30 - 13:15
Room: NCSS Seminar room
13:15
Animation for presentations: Creating movies to show off your data
Creating movies to show off your data
13:15 - 14:15
Room: NCSS Seminar room
14:15
Practical session - Rendering and animation
14:15 - 15:30
Room: NCSS Seminar room
15:30
Coffee break
15:30 - 16:00
Room: NCSS Seminar room
16:00
Practical session: Rendering and animation (contd.)
16:00 - 17:00
Room: NCSS Seminar room
17:00
Closing session- Round up
17:00 - 17:10
Room: NCSS Seminar room