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SUMMARY:CT@IMBL-2019
DTSTART:20190317T130000Z
DTEND:20190319T072500Z
DTSTAMP:20261017T025200Z
UID:indico-event-97@events.synchrotron.org.au
CONTACT:chris.hall@synchrotron.org.au\;03 8540 4239
DESCRIPTION:Speakers: Andreas Moll (Australian Synchrotron)\, Ron Bosworth
  (Australian Synchrotron)\, Hausermann Daniel (Australian Synchrotron)\, S
 herry Mayo (CSIRO)\, Andrew Stevenson (Australian Synchrotron/ CSIRO)\, An
 ton Maksimenko (Australian Synchrotron)\, Chris Hall (Australian Synchrotr
 on)\n\nImaging and Medical Beamline CT workshop: CT@IMBL-2019\n\nThanks f
 or you interest in the CT workshop.\n\nThe registration limit has been rea
 ched. If you would like to be put on the reserve list for the next worksho
 p please email Chris Hall (chris.hall@synchrotron.org.au)\n\nThe purpose o
 f the workshop is to increase familiarity with the techniques for collecti
 ng and processing data from the IMBL.\n\nDuring these two days we will ma
 ke presentations and run tutorial sessions covering all operations\, fro
 m setting up the beam line\, collecting data\, to reconstructing and vi
 sualising CT data on IMBL.\n\nIn the mornings a series of talks will exp
 lain the principles. Hands-on practical sessions in the afternoons will a
 llow you to practice IMBL CT work-flows using your own\, or demonstration
  data sets. Sessions will be run by Synchrotron and CSIRO staff.\n\nOn the
  first day there will be an opportunity to visit the beamline.\n\nDay 1: 
 Takes you through the components of the beam line and the principles of co
 mputed tomography. This will be followed by descriptions of the interfaces
 \, and how we run a CT scan on IMBL. Once data has been collected the man
 agement of data will be explained including remote access and transfer. F
 irst level processing including reconstruction of 3-D volume data cubes fr
 om raw data will be demonstrated. The new ASCI compute cluster will be us
 ed and its use for processing IMBL data demonstrated. A practical session 
 in the afternoon will allow delegates to practice using their own\, or our
  provided training data.\n\nDay 2: Once simple reconstruction is complete
 \, visualisation is the next step in the process.Processing of large amoun
 ts of data using scripts will be described. 3-D visualisation will be exp
 lained\, using the tools available on the ASCI Compute Desktop. A new ses
 sion will be introduced\, where experienced Users will describe their expe
 riments and experiences on IMBL.  A second practical session after lunch 
 will allow for practice and questions.\n\nWorkshop topics will include:\
 n\n\n	Practical considerations for mounting and moving samples\n	How to ch
 oose the best x-ray energy\n	Avoiding artefacts in the reconstructed data\
 n	Presenting CT data through segmentation and animation\n\n\nRegistration\
 n\n\n	Includes a light lunch\, morning and afternoon teas. Supper on Monda
 y evening.\n	Access to all workshop materials\n\n\n​Accomodation and tra
 vel assistance\n\n\n	Accomodation will be made available at the AS guest h
 ouse. This will be at no cost\, for registered interstate and country Vict
 oria participants only.\n	Other participants may book guest house accommod
 ation at their own expense.\n	To book a room please click on the Guesthou
 se link.\n\n\nWhat you will need to provide\n\nAccess to the IMBL filestor
 e and ASCI computer is through a web page interface\, Please bring along y
 our own laptop/tablet for this. If for some reason you are not able to do 
 this we may be able to provide a laptop. Please let us know during registr
 ation if you would like to book one.\n\nWe look forward to seeing you at 
 the Australian Synchrotron in March...\n\nChris Hall\, Anton Maksimenko\, 
 Andrew Stevenson\, Sherry Mayo...Workshop Organisers\n\n\n \n\nhttps://ev
 ents.synchrotron.org.au/event/97/
LOCATION:NCSS Seminar room (Australian Synchrotron)
URL:https://events.synchrotron.org.au/event/97/
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